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Best Payment Providers That Integrate with Xero (Including High-Risk Options)

31 March 2025

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Written by Libby James
Libby James is co-founder, director and an expert in all things merchant services. Libby is the go-to specialist for business with more complex requirements or businesses that are struggling to find a provider that will accept them. Libby is regularly cited in trade, national and international media.
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    Payment Providers that work with Xero

    If your business uses Xero for accounting, choosing a payment provider that integrates with Xero can save hours of admin, help you get paid faster, and improve your cash flow visibility.

    Whether you're running an eCommerce store, service-based business, or operating in a high-risk sector, there are merchant accounts and payment gateways available that work with Xero—some plug-and-play, others via custom integrations.

    In this guide, we’ll walk you through the benefits of integrating payments with Xero, the best providers (including for high-risk businesses), and answer some frequently asked questions to help you choose the right solution.

    Why Use a Xero-Compatible Payment Provider?

    Integrating your payment provider with Xero can transform the way you manage your accounts and payments:

    1. Get Paid Faster

    Xero-compatible payment gateways let you add a “Pay Now” button to your invoices. Your customers can pay instantly using credit card, debit card, PayPal, or direct debit—reducing delays.

    2. Automatic Reconciliation

    Payments received are matched automatically to invoices in Xero. This removes the need for manual data entry and keeps your accounts accurate and up to date.

    3. Real-Time Cash Flow Insight

    With live payment data syncing into Xero, you can view outstanding balances, track paid invoices, and make informed financial decisions.

    4. Smoother Customer Experience

    Providing convenient, professional, and trusted ways for your customers to pay increases your chances of getting paid on time—while boosting your brand credibility.

    5. Less Admin, More Time

    Reduce back-office work and avoid reconciling accounts across multiple systems. Xero payment integration helps you focus more on growing your business and less on spreadsheets.

    Top Xero Payment Providers for Low-Risk Businesses

    These mainstream providers integrate directly with Xero and are best suited for businesses operating in low-risk sectors like retail, hospitality, consultancy, and digital services:

    • Stripe – A popular, easy-to-use payment gateway for online card payments.
    • GoCardless – Perfect for recurring direct debit payments or subscription billing.
    • PayPal – A trusted option with broad consumer recognition.
    • Square – Great for combining in-person and online transactions with simple Xero integration.
    • Worldpay – Offers multiple payment methods and is suitable for growing businesses.

    These providers can typically be connected with a few clicks and are ideal if your business fits within traditional banking risk profiles.

    Xero Payment Providers for High-Risk Businesses

    High-risk sectors such as CBD, financial products, travel, supplements, or ticketing often struggle to access mainstream payment solutions. But that doesn’t mean you can’t integrate with Xero.

    Some high-risk merchant account providers offer custom or third-party integrations with Xero.

    Features to Look For:

    • Manual or API integration with Xero
    • Industry-specific experience and compliance support
    • Transparent fees and rolling reserves (where applicable)
    • Quick settlement times despite high-risk status

    Merchant Advice Service works with a wide range of high-risk payment processors who can help your business take payments securely while integrating data back into Xero. These partnerships include providers with experience handling regulated sectors and international payment needs.

    How to Choose the Right Xero-Compatible Payment Provider

    When comparing providers, consider the following:

    • Industry risk level – Are you high-risk or low-risk?
    • Recurring vs one-time payments – Do you need subscriptions or just invoicing?
    • Settlement speed – How quickly do you need to access your funds?
    • International payments – Do you take payments in multiple currencies?
    • Fees and reserves – What are the true costs of processing?

    To make this process easier, The Payments Directory® helps businesses filter providers based on key criteria—including integration options with platforms like Xero, supported MCC (merchant category) codes, accepted payment methods, and operating geographies. This tool is especially useful for high-risk or niche sectors where not every provider will be suitable. Instead of approaching multiple providers manually, merchants can shortlist those that match their specific industry and technical needs in just a few clicks.

    Need Help Choosing a Xero-Compatible Payment Provider?

    Merchant Advice Service offers independent support to help businesses—especially those in high-risk sectors—find suitable merchant services that integrate with Xero.

    We’ll help you:

    • Compare payment gateways
    • Find Xero-compatible merchant accounts
    • Understand high-risk requirements
    • Save time and reduce fees

    Speak to an expert today for free, no-obligation advice.

    FAQs

    What is the best payment gateway that integrates with Xero?
    For most UK businesses, Stripe, GoCardless, and Square offer easy Xero integrations. The best choice depends on your payment type—card, direct debit, or in-person.
    Can high-risk businesses integrate their payment provider with Xero?
    Yes. While major gateways may decline high-risk businesses, there are specialist merchant providers that offer Xero-compatible solutions via API or manual sync.
    Is Stripe compatible with Xero?
    Yes. Stripe integrates directly with Xero, allowing you to accept card payments and automatically reconcile transactions against invoices.
    Can I add a Pay Now button to my Xero invoices?
    Absolutely. With a supported payment gateway like Stripe, PayPal or GoCardless, Xero invoices can include a “Pay Now” button that links directly to payment.
    What’s the difference between payment gateways and merchant accounts?
    A payment gateway processes payments (like Stripe or PayPal), while a merchant account holds the funds before settlement. High-risk businesses often need custom merchant accounts.
    Can I accept international payments and still integrate with Xero?
    Yes. Many gateways that work with Xero support multi-currency payments. Make sure your Xero plan includes multi-currency support.
    Are there extra fees for integrating payments with Xero?
    While Xero doesn’t charge for integrations, your payment provider will charge transaction fees. Always review the pricing terms before signing up.
    How do I find a Xero payment provider for my industry?
    Merchant Advice Service can match you with a provider based on your industry, payment needs, and integration preferences. Get in touch for free, unbiased guidance.

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